Avida

 

Timeline


and .

03/01/10:

17:07 Changeset [3656] by ruppmatt

Removing debug code.

16:34 Changeset [3655] by baerb

In text viewer set it so the correct name of the instruction set file ...

15:35 Changeset [3654] by ruppmatt

Added ability to set all demes initial instruction set ID randomly. Added ...

15:17 Changeset [3653] by zaman

added flag to thread to skip execution

15:00 Changeset [3652] by ruppmatt

Incremental update.

02/25/10:

15:49 Changeset [3651] by blwalker

Added WRITE_CLONE, WRITE_INJECT_EVENTS, and WRITE_COMPETITION analyze ...

02:28 Changeset [3650] by pakanati

Another minor avida viewer bug related to zooming, caused by indexing ...

02:15 Changeset [3649] by pakanati

fixed small bug in viewer where reactions had to ALL have resources or ...

02/23/10:

18:06 Changeset [3648] by goingssh

Added SetMigrant?() call to cell chosen for migration when using ...

02/17/10:

17:33 Changeset [3647] by ruppmatt

Updating to make cPopulation.h compatible with alice.

02/16/10:

15:12 Changeset [3646] by ruppmatt

Fixed bug in InheritInstSet? code that would cause instructions to almost ...

02/15/10:

21:50 Changeset [3645] by hjg

Added support for an inject deme event that injects a deme with an ...

02/13/10:

17:27 Changeset [3644] by ruppmatt

Got deme scheduler working.

02/11/10:

18:07 Changeset [3643] by ruppmatt

Removing unnecessary action fields.

17:42 Changeset [3642] by dk

bugfix: hgt fragment transformation was broken; added error checking on ...

17:33 Changeset [3641] by dk

Added post-selection HGT fragment transformations.

02/10/10:

16:56 Changeset [3640] by ruppmatt

Removed debug output.

16:55 Changeset [3639] by ruppmatt

Fixed bug with event parsing.

16:09 Changeset [3638] by dk

Added option to scramble HGT fragments prior to insertion or replacement.

15:45 Changeset [3637] by ruppmatt

Fixed bug to keep mutating inst set ids positive.

15:30 Changeset [3636] by ruppmatt

Bug fixes.

09:26 Changeset [3635] by ruppmatt

Updating to include some deme actions for altering instset id and print ...

02/09/10:

13:56 Changeset [3634] by dk

added missing include for std::random_shuffle.

13:26 Changeset [3633] by dk

Added print action to calculate average edit distance, enabled ...

02/08/10:

11:03 Changeset [3632] by dk

Added neighborhood-based HGT conjugation.

10:20 Changeset [3631] by blwalker

Hey, check it out, I fail at not deleting random sections of code. Fixed ...

10:16 Changeset [3630] by blwalker

Fixed some comments. Clearly copy-paste had been abused...

02/07/10:

11:42 Changeset [3629] by dk

Added hgt conjugation, refactored genome splitting.

02/05/10:

17:03 Changeset [3628] by ruppmatt

Got EventTriggers? with state information using flex vars working.

14:39 Changeset [3627] by ruppmatt

Incremental update. Still fussing with triggerable events.

13:52 Changeset [3626] by blwalker

Moved lineage label to the last column of SaveStructuredPopulation? so it ...

13:04 Changeset [3625] by blwalker

I ran the long tests and didn't even notice I'd broken this one. ...

02/04/10:

15:54 Changeset [3624] by ruppmatt

Incremental changes including addition of triggered event handling via ...

02/03/10:

14:06 Ticket #1239 (Speculative execution that respects energy) created by beckma24
When using the energy model a user cannot use speculative execution. …
13:47 Ticket #8 (Consistency Tests Fail on HPC Cluster) closed by brysonda
fixed: Fixed in r3424.
13:10 Changeset [3623] by blwalker

Added "lineage" option to DETAIL documentation (the option was already ...

02/02/10:

14:41 Changeset [3622] by dk

Added HGT source option.

02/01/10:

18:41 Changeset [3621] by ruppmatt

Incremental update to include deme actions, pre and post replacement ...

01/30/10:

15:01 Changeset [3620] by ruppmatt

Adding configuration options to handle additional schedulers.

14:56 Changeset [3619] by ruppmatt

Adding Art's deme-based schedulers.

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